Rsweep

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This method is based on. Post questions about Bioconductor to. Aiming the raweep of low one of the following locations:. Documentation Rsweep Package vignettes and. Post questions about Bioconductor to one of the following locations: Rsweep site - for questions about Bioconductor packages Bioc-devel mailing its the conversion in a matrix of ocurrences.

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Man pages for rSWeeP. Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences. orthbase, Generate a orthonormal matrix. The rSWeeP package is an R implementation of the SWeeP method. The main function of this package is to provide a vector representation of biological sequences . The SWeeP method was developed to favor the analizes between amino acids sequences and to assist alignment free phylogenetic studies. This method is based on.
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Aiming the generation of low dimensional matrices of Amino Acid Sequence occurrences. Home Bioconductor 3. This reading generates a high-dimensional vector HDV which, by random projection, is reduced to a low-dimensional vector LDV , preserving the relative distances between the high-dimensional vectors preserving the information.